Information for motif2


Reverse Opposite:

p-value:1e-27
log p-value:-6.231e+01
Information Content per bp:1.799
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets91.4 +/- 58.6bp
Average Position of motif in Background54.3 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0481.1_FOXP1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGCTCTGTTT-------
--CTTTGTTTACTTTTN

MA0593.1_FOXP2/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGCTCTGTTT----
---TNTGTTTACTT

MA0483.1_Gfi1b/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCTCTGTTT-
TGCTGTGATTT

MA0514.1_Sox3/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCTCTGTTT-
-CCTTTGTTTT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCTCTGTTT--
----CTGTTTAC

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCTCTGTTT-------
NNNTTTGTTTACNTTNN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCTCTGTTT----
--NYYTGTTTACHN

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCTGTTT-----
NNNNTTTGTTTACNNT

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCTCTGTTT-------
NNCTTTGTTTTGNTNNN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTCTGTTT-
-GCAGTGATTT