Information for motif20


Reverse Opposite:

p-value:1e-19
log p-value:-4.417e+01
Information Content per bp:1.712
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets99.1 +/- 53.9bp
Average Position of motif in Background88.0 +/- 44.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CACCTCTCTGAA
NNGGCGACACCTCNNN---

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACCTCTCTGAA-
-NTTTCTNAGAAA

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACCTCTCTGAA---
NANTTCATTGAATTA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACCTCTCTGAA
TGACACCT-------

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CACCTCTCTGAA
NNCACCTGNN----

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACCTCTCTGAA
NNGCACCTTTCTCC-

MA0518.1_Stat4/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CACCTCTCTGAA-
NNNTTTCCTGGAAA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CACCTCTCTGAA--
---TTCTTGGAAAN

VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CACCTCTCTGAA----
NNNTGAACTCNNTGACCTCN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CACCTCTCTGAA--
----CCTTTGATGT