Information for motif25


Reverse Opposite:

p-value:1e-16
log p-value:-3.854e+01
Information Content per bp:1.755
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets125.2 +/- 55.3bp
Average Position of motif in Background133.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTAGCCAGACGT
-ATGCCAGACN-

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTAGCCAGACGT----
CAAATCCAGACATCACA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TTAGCCAGACGT--
----CCAGACRSVB

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTAGCCAGACGT
----CCAGACAG

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTAGCCAGACGT-----
AAGGCCAGATGGTCCGG

MA0161.1_NFIC/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAGCCAGACGT
--TGCCAA----

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTAGCCAGACGT
--AACCGGAAGT

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTAGCCAGACGT-
GANGTTAACTAGTTTNN

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTAGCCAGACGT
--ANCCGGAAGT

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTAGCCAGACGT
AGCTGTTAACTAGCCGT