Information for motif27


Reverse Opposite:

p-value:1e-16
log p-value:-3.765e+01
Information Content per bp:1.508
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets121.5 +/- 60.8bp
Average Position of motif in Background153.5 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCAACTATTGAG----
NAAANTTATTGAANCAN

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCAACTATTGAG
CGACCAACTGCCGTG

PH0058.1_Hoxb3/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCAACTATTGAG----
TNNNACTAATTAGNTCA

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAACTATTGAG
GCCATCTGTT---

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAACTATTGAG
--AATTATT---

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAACTATTGAG---
GCGAACTAATTAATGC

PH0027.1_Emx2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAACTATTGAG----
NNCCACTAATTAGNNNT

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCAACTATTGAG-----
AAACATAATGAGGTTGC

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAACTATTGAG
CCATATATGG--

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCAACTATTGAG-
CNGACACCTGTTCNNN