Information for motif29


Reverse Opposite:

p-value:1e-15
log p-value:-3.678e+01
Information Content per bp:1.694
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif4.08%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets91.3 +/- 49.6bp
Average Position of motif in Background67.2 +/- 54.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGCTGTCGGT-----
AGCTGTCACTCACCT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGTCGGT
CAGCTGTT---

MA0521.1_Tcf12/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGTCGGT
NNGCAGCTGTT---

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGTCGGT
NNGCAGCTGTC---

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGTCGGT---
NNNCAGCTGTCAATATN

MA0499.1_Myod1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCTGTCGGT
TGCAGCTGTCCCT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGTCGGT
ACAGCTGTTV--

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCGGT--
AACTAGCTGTCAATAC

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCGGT
NAHCAGCTGD----

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCTGTCGGT
-GCTGTG---