Information for motif31


Reverse Opposite:

p-value:1e-15
log p-value:-3.544e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets119.6 +/- 57.4bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGTCGATCTTT
NTATYGATCH--

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGTCGATCTTT----
NNNGTGACCTTTGNNN

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGTCGATCTTT----
NNNNTGACCTTTNNNN

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCGATCTTT----
NDBAGATRWTATCTVNNNNN

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAGTCGATCTTT----
----TGACCTTTNCNT

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCGATCTTT-
NNTAAAAACGATGTTNT

MA0095.2_YY1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAGTCGATCTTT
GCNGCCATCTTG

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------GAGTCGATCTTT
NTNNNAGGAGTCTCNTN--

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCGATCTTT------
NTGACTCANTTTTTCCANTN

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCGATCTTT
NTTGATTNNATCAN-