| p-value: | 1e-14 |
| log p-value: | -3.246e+01 |
| Information Content per bp: | 1.712 |
| Number of Target Sequences with motif | 19.0 |
| Percentage of Target Sequences with motif | 1.68% |
| Number of Background Sequences with motif | 2.8 |
| Percentage of Background Sequences with motif | 0.20% |
| Average Position of motif in Targets | 103.8 +/- 59.2bp |
| Average Position of motif in Background | 69.7 +/- 14.8bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | -7
| | Orientation: | forward strand |
| Alignment: | -------CATGGATAGC------
ACTGACCCTTGGTTACCACAAAG |
|
|
|
PB0160.1_Rfxdc2_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATGGATAGC----
CTACTTGGATACGGAAT |
|
|
|
PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATGGATAGC--
TACCCTAGTTACCGA |
|
|
|
MA0138.2_REST/Jaspar
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | -8
| | Orientation: | forward strand |
| Alignment: | --------CATGGATAGC---
TTCAGCACCATGGACAGCGCC |
|
|
|
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -7
| | Orientation: | reverse strand |
| Alignment: | -------CATGGATAGC---
TCAGCACCATGGACAGCTCC |
|
|
|
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CATGGATAGC
AATGGAAAAT |
|
|
|
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 7 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CATGGATAGC--
-AAGGATATNTN |
|
|
|
MA0152.1_NFATC2/Jaspar
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CATGGATAGC
--TGGAAAA- |
|
|
|
MA0463.1_Bcl6/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CATGGATAGC-
TTTCCTAGAAAGCA |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CATGGATAGC
ATGATKGATGRC |
|
|
|
