Information for motif35


Reverse Opposite:

p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.764
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets93.9 +/- 67.3bp
Average Position of motif in Background76.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCGAACTCTCA-----
--NNAATTCTCGNTNAN

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCGAACTCTCA
--CCAACTGCCA

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCGAACTCTCA--
---AGCCACTCAAG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCGAACTCTCA-
---AASCACTCAA

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCGAACTCTCA-----
--AGTATTCTCGGTTGC

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCGAACTCTCA-----
--ACCACTCTCGGTCAC

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCGAACTCTCA-----
NNNCAGCTGTCAATATN

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCGAACTCTCA---
CGACCAACTGCCATGC

MA0483.1_Gfi1b/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCCGAACTCTCA---
----AAATCACAGCA

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCCGAACTCTCA
--CCAACTGCCA