Information for motif36


Reverse Opposite:

p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets99.9 +/- 63.1bp
Average Position of motif in Background12.6 +/- 0.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCCCCGGC---
ATTGCCTCAGGCAAT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCCCCGGC---
NTNGCCTCAGGCNNN

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCCCCGGC---
NTCCCCTCAGGGANT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCCCCGGC---
NTCGCCTCAGGCAAT

MA0524.1_TFAP2C/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCGGC--
CATGGCCCCAGGGCA

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCCCCGGC---
AAATTCCCCCCGGAAGT

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGC-----
CCCCCCCGGGGGGGT

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCCCCGGC
WTGSCCTSAGGS

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGC-----
CCCCCCCGGGGGGGT

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCCGGC
CCACTTCCGGC