Information for motif39


Reverse Opposite:

p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.741
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets98.2 +/- 47.7bp
Average Position of motif in Background50.6 +/- 55.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGAAACCGGGG
ACTGAAACCA---

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GAGAAACCGGGG
GNNACCGAGAATNNN---

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GAGAAACCGGGG
TTGACCGAGAATTCC---

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAACCGGGG
GAAAGTGAAAGT----

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GAGAAACCGGGG
NNNNGGGGGAAGANGG--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGAAACCGGGG
CSTGGGAAAD-----

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GAGAAACCGGGG
CGTATCGAAACCAAA-

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GAGAAACCGGGG-
CTGATCGAAACCAAAGT

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GAGAAACCGGGG
GAGAACCGAAACTG---

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAGAAACCGGGG---
NNAGGGACAAGGGCNC