Information for motif4


Reverse Opposite:

p-value:1e-25
log p-value:-5.823e+01
Information Content per bp:1.745
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets104.6 +/- 57.6bp
Average Position of motif in Background127.4 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GACYCAGRAAAG
--NACAGGAAAT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GACYCAGRAAAG
--NACAGGAAAT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GACYCAGRAAAG-
---ACAGGAAGTG

MA0598.1_EHF/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GACYCAGRAAAG
----CAGGAAGG

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACYCAGRAAAG
ATGACTCAGCAD--

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GACYCAGRAAAG
----CAGGAAAT

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACYCAGRAAAG
--AACAGGAAGT

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GACYCAGRAAAG
--CACAGN----

MA0474.1_Erg/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GACYCAGRAAAG--
---ACAGGAAGTGG

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACYCAGRAAAG
TGACTCAGCA---