Information for motif41


Reverse Opposite:

p-value:1e-12
log p-value:-2.944e+01
Information Content per bp:1.668
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets105.8 +/- 57.0bp
Average Position of motif in Background72.2 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TATTTCGTGC-
-ATTTCCTGTN

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TATTTCGTGC--
--TTGCGTGCVA

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TATTTCGTGC-
-ATTTCCTGTN

MA0156.1_FEV/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TATTTCGTGC
-ATTTCCTG-

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTTCGTGC
CTATTTTTGG-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TATTTCGTGC
KCTATTTTTRGH

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TATTTCGTGC
CACTTCCTGT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TATTTCGTGC-
TTTTTTTTCNNGTN

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATTTCGTGC--
TTCTATTTTTAGNNN

MA0042.1_FOXI1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TATTTCGTGC
GGATGTTTGTTT-