Information for motif42


Reverse Opposite:

p-value:1e-12
log p-value:-2.944e+01
Information Content per bp:1.530
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.5 +/- 53.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCAGCGCCCTG
GCCGCGCAGTGCGT--

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCAGCGCCCTG
-GCCCCACCCA-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCAGCGCCCTG
-GCCMCRCCCH-

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCAGCGCCCTG
GGGGCCGAGGCCTG

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCAGCGCCCTG
-GCCCCGCCCC-

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCAGCGCCCTG
GGCCCCGCCCCC

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGCAGCGCCCTG
--CAGCC-----

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCAGCGCCCTG
CACAGN------

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGCGCCCTG--
NNNGGGGCGCCCCCNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CGCAGCGCCCTG
NNNANTGCAGTGCNNTT