Information for motif48


Reverse Opposite:

p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.744
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets112.2 +/- 54.3bp
Average Position of motif in Background81.5 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)2.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGKTTGMTTTT-----
TNNNATGATTTCNNCNN

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGKTTGMTTTT-
NNANTGATTGATNTTN

MA0468.1_DUX4/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGKTTGMTTTT
-TGATTAAATTA

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGKTTGMTTTT-
NNNTTAATTGGTTTTT

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGKTTGMTTTT-
NNANTGATTGATNNNN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGKTTGMTTTT
-TGTTTACTTT-

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGKTTGMTTTT
-TAATTGATTA-

MA0042.1_FOXI1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGKTTGMTTTT
GGATGTTTGTTT--

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGKTTGMTTTT-----
GNATTTTTTTTTTGANC

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGKTTGMTTTT
-TGTTTACTTT-