Information for motif56


Reverse Opposite:

p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.530
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets121.1 +/- 46.5bp
Average Position of motif in Background76.1 +/- 51.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCTGTTTCGGTT---
-CAGTTTCGNTTCTN

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCTGTTTCGGTT---
NTGGTTTCGGTTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTTTCGGTT--
TNTGGTTTCGATACN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCTGTTTCGGTT
----TGTCGGTT

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTTTCGGTT--
NNNTTGGTTTCGNTNNN

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCTGTTTCGGTT---
TNAGTTTCGATTTTN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTGTTTCGGTT--
--RSTTTCRSTTTC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTGTTTCGGTT--
--AGTTTCAGTTTC

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTGTTTCGGTT---
TCAGTTTCATTTTCC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTGTTTCGGTT
-TGGTTTCAGT-