Information for motif8


Reverse Opposite:

p-value:1e-22
log p-value:-5.169e+01
Information Content per bp:1.832
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets95.5 +/- 55.8bp
Average Position of motif in Background57.1 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTSACAG--
NNNTGAGTGACAGCT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GGGCTSACAG-
-----CACAGN

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGCTSACAG-
GGTGYTGACAGS

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGCTSACAG------
GGATTGACAGGTCNTT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTSACAG-
NTGATTGACAGN

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCTSACAG--
TGAGTGACAGSC

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCTSACAG------
GTATTGACAGGTNNTT

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGCTSACAG------
NNATTGACAGGTGCTT

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGCTSACAG------
GTATTGACAGCTNNTT

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGCTSACAG------
NTATTGACAGCTNNTT