Information for motif1


Reverse Opposite:

p-value:1e-30
log p-value:-6.995e+01
Information Content per bp:1.826
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets95.2 +/- 45.6bp
Average Position of motif in Background102.7 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTAGCATCA-
-ATTGCATCAK

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTTAGCATCA-
-ATTGCATCAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTTAGCATCA
ATTTGCATAA

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTTAGCATCA--
--TTGCAACATN

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTTAGCATCA-
NGTAGGTTGGCATNNN

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTTAGCATCA--
ATGATCGAATCAAA

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTAGCATCA---
TAGTGATCATCATTA

PB0125.1_Gata3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTTAGCATCA------
NNNNNCGATANNATCTNNNNAN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGCATCA
TGAGTCAGCA---

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GTTAGCATCA---
NNNNNBAGATAWYATCTVHN