Information for motif11


Reverse Opposite:

p-value:1e-18
log p-value:-4.355e+01
Information Content per bp:1.709
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets106.3 +/- 54.9bp
Average Position of motif in Background126.8 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAATAGCAATGA
NTTNAGAACAATTA

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAATAGCAATGA----
AAAAACCAATTAAGAA

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TAATAGCAATGA---
NNNTAACAATTATAN

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATAGCAATGA--
NNTNANAACAATTNNA

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAATAGCAATGA------
-ACAAGCAATTAATGAAT

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAATAGCAATGA-
AAAAATAACAAACGG

PH0042.1_Hmx2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAATAGCAATGA------
-ACAAGCAATTAAAGAAT

MA0087.1_Sox5/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TAATAGCAATGA
---NAACAAT--

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAATAGCAATGA------
-ACAAGCAATTAAAGAAT

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAATAGCAATGA---
TTAAGAACAATAAATT