Information for motif15


Reverse Opposite:

p-value:1e-18
log p-value:-4.191e+01
Information Content per bp:1.681
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets115.0 +/- 57.4bp
Average Position of motif in Background76.5 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTTYAGTCT-
AGTTTCAGTTTC

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTTYAGTCT
TGGTTTCAGT--

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTYAGTCT-
RSTTTCRSTTTC

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGTTYAGTCT------
NAGTTTCABTHTGACTNW

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGTTYAGTCT--
TCAGTTTCATTTTCC

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGTTYAGTCT--
NTGGTTTCGGTTNNN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGTTYAGTCT-
-CTYRAGTGSY

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGTTYAGTCT-
ACTTTCACTTTC

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGTTYAGTCT--
TNNTGCTACTGTNNNN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GGTTYAGTCT
TGTCGGTT------