Information for motif16


Reverse Opposite:

p-value:1e-17
log p-value:-3.930e+01
Information Content per bp:1.826
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets99.6 +/- 50.5bp
Average Position of motif in Background90.9 +/- 50.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGTCATGAT
AGGTCA----

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGAT
CGCGCCGGGTCACGTA

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GGGTCATGAT-
NTNNNGGGGTCANGNNN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGGTCATGAT
--GTCATN--

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGAT
AGAGCGGGGTCAAGTA

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGAT-
GGCGAGGGGTCAAGGGC

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGAT-
CTCCAGGGGTCAATTGA

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGGTCATGAT
ATCAAGGTCA----

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGAT
TCTCAAAGGTCACGAG

MA0258.2_ESR2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGTCATGAT-----
AGGTCACCCTGACCT