Information for motif17


Reverse Opposite:

p-value:1e-16
log p-value:-3.914e+01
Information Content per bp:1.847
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets111.6 +/- 47.8bp
Average Position of motif in Background163.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TAATTTATTTCT
TAATTGATTA--

MA0135.1_Lhx3/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TAATTTATTTCT
GATTAATTAATTT--

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTATTTCT-
GANTTAATTAATTAANN

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTATTTCT
NNNTTAATTGGTTTTT

PH0142.1_Pou1f1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTATTTCT-
GANTTAATTAATTANNN

MA0485.1_Hoxc9/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTATTTCT
NTGATTTATGGCC

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTTATTTCT
CNNAGTAATTAATTNNC

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAATTTATTTCT
CCATAATTAATTACA

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTATTTCT
GNATTAATTAGTTNNC

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTATTTCT
AAATTAATTGATTTNG