Information for motif21


Reverse Opposite:

p-value:1e-16
log p-value:-3.693e+01
Information Content per bp:1.566
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets87.2 +/- 54.6bp
Average Position of motif in Background64.8 +/- 39.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0442.1_SOX10/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GGAATCTCTGTG
-----CTTTGT-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAATCTCTGTG
-AAATCACTGC-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAATCTCTGTG
CCWGGAATGY-----

MA0514.1_Sox3/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAATCTCTGTG--
----CCTTTGTTTT

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGAATCTCTGTG-----
-NNNNTTGTGTGCTTNN

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGAATCTCTGTG
------GCTGTG

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAATCTCTGTG----
-----GTCTGTGGTTT

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAATCTCTGTG-----
TNNTCCTTTGTTCTNNT

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGAATCTCTGTG-----
-ANTCCTTTGTCTNNNN

MA0113.2_NR3C1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAATCTCTGTG--
AGNACATTNTGTTCT