Information for motif28


Reverse Opposite:

p-value:1e-13
log p-value:-3.126e+01
Information Content per bp:1.480
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets106.4 +/- 56.1bp
Average Position of motif in Background130.5 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGAGATGTG
NACAGGAAAT---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACAGGAGATGTG
NACAGGAAAT---

MA0156.1_FEV/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACAGGAGATGTG
-CAGGAAAT---

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACAGGAGATGTG
AACAGGAAGT---

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACAGGAGATGTG
ACAGGAAGTG--

MA0098.2_Ets1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACAGGAGATGTG
NNNACAGGAAGTGGN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACAGGAGATGTG
-AAGGATATNTN

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACAGGAGATGTG
ACAGGAAGTG--

MA0474.1_Erg/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACAGGAGATGTG
ACAGGAAGTGG-

MA0136.1_ELF5/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACAGGAGATGTG
-AAGGAAGTA--