Information for motif30


Reverse Opposite:

p-value:1e-12
log p-value:-2.891e+01
Information Content per bp:1.651
Number of Target Sequences with motif227.0
Percentage of Target Sequences with motif11.01%
Number of Background Sequences with motif225.2
Percentage of Background Sequences with motif6.69%
Average Position of motif in Targets99.6 +/- 56.8bp
Average Position of motif in Background109.7 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ATAATTATAA-----
TATAATTATAATATTC

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-ATAATTATAA-----
NNTAATTATAATNANN

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-ATAATTATAA-----
GCTAATTATAATTATC

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ATAATTATAA-----
TAAGATTATAATACGG

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTATAA--
TCGCGATAATTACCGAC

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATAATTATAA-
TGTATATATATACC

PH0021.1_Dlx2/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ATAATTATAA---
GGAATAATTACCTCAG

MA0075.1_Prrx2/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ATAATTATAA
--AATTA---

PB0001.1_Arid3a_1/Jaspar

Match Rank:9
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ATAATTATAA---
GGGTTTAATTAAAATTC

PH0023.1_Dlx4/Jaspar

Match Rank:10
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTATAA--
GCGCTATAATTACCGAC