Information for motif32


Reverse Opposite:

p-value:1e-12
log p-value:-2.862e+01
Information Content per bp:1.505
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets90.8 +/- 48.6bp
Average Position of motif in Background104.2 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTAGAAAAATGT---
TTAAGAACAATAAATT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTAGAAAAATGT
TACTGGAAAAAAAA

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTAGAAAAATGT--
GTTCAAAAAAAAAATTC

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTAGAAAAATGT
-TGGAAAA----

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTAGAAAAATGT--
NNTNANAACAATTNNA

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTAGAAAAATGT---
TTTAGAACAATAAAAT

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTAGAAAAATGT
CTACCAATAAAATTCT

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTAGAAAAATGT
NTTNAGAACAATTA

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTAGAAAAATGT
AAACCTCGTAAAATTT

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTAGAAAAATGT
AAATAAGAAAAAAC-