Information for motif33


Reverse Opposite:

p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.830
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets114.4 +/- 54.5bp
Average Position of motif in Background62.8 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AATGATCACA-
TAATGATGATCACTA

MA0488.1_JUN/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATGATCACA-
AAGATGATGTCAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATGATCACA--
AAAGATGATGTCATC

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATGATCACA-----
CAGATGTGCACATACGT

PH0079.1_Hoxd3/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AATGATCACA-
ANGNTAATTANCNCAN

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATGATCACA---
CAAACAACAACACCT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AATGATCACA
--AGATAASR

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATGATCACA
-ATGTTTAC-

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATGATCACA---
-ATGACGTCATCN

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AATGATCACA----
NTNTATGTGCACATNNN