Information for motif35


Reverse Opposite:

p-value:1e-11
log p-value:-2.604e+01
Information Content per bp:1.904
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets105.1 +/- 48.0bp
Average Position of motif in Background59.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGYCGTKA
TGACGT--

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TGYCGTKA--
GNNATTTGTCGTAANN

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGYCGTKA-
ATGGGGTGAT

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGYCGTKA---
GTGACGTCACCG

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGYCGTKA---
GTGGCGTGACNG

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGYCGTKA-
ATGGGGTGAT

MA0595.1_SREBF1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGYCGTKA-
GTGGGGTGAT

MA0018.2_CREB1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGYCGTKA
TGACGTCA

PB0004.1_Atf1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGYCGTKA----
ACGATGACGTCATCGA

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGYCGTKA
GATGACGTCA