Information for motif36


Reverse Opposite:

p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.957
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets97.7 +/- 51.1bp
Average Position of motif in Background80.0 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGCTAA--
AAGATAAGATAACA

MA0051.1_IRF2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAAGCTAA--------
GGAAAGCGAAACCAAAAC

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGCTAA
TGGAAAA-----

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGCTAA
ANGNAAAGGTCA

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAAAGCTAA-
-ATATGCAAAT

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAGCTAA----
GGAAANTGAAACTNA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGCTAA
NAGATAAGNN--

MA0507.1_POU2F2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAAAGCTAA----
-ATATGCAAATNNN

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAAAAGCTAA-
-TTATGCAAAT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGCTAA
CAGATAAGGN--