Information for motif39


Reverse Opposite:

p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.907
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets96.7 +/- 49.2bp
Average Position of motif in Background93.2 +/- 49.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGYGACGT
--TGACGT

MA0018.2_CREB1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGYGACGT--
--TGACGTCA

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGYGACGT-----
-GTGACGTCACCG

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGYGACGT------
ACGATGACGTCATCGA

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGYGACGT--
GATGACGTCA

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGYGACGT-----
-ATGACGTCATCN

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGYGACGT------
NCGATGACGTCATCGN

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGYGACGT------
NNNTNGTACGTAANNNN

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGYGACGT---
---TACGTGCV

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGYGACGT-----
-ATGACGTCATCN