Information for motif45


Reverse Opposite:

p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.656
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets72.0 +/- 52.0bp
Average Position of motif in Background125.4 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGTCTTACT
CNAGGCCT----

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGTCTTACT
AGGTGTTAAT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGTCTTACT
AGGTGTCA--

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGGTCTTACT-
TATTCAAGGTCATGCGA

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGGTCTTACT----
------TACTNNNN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGTCTTACT
AGGTGTGAAM

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGGTCTTACT--
GCGGAGGTGTCGCCTC

MA0009.1_T/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGTCTTACT
CTAGGTGTGAA-

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGTCTTACT
CTAGGCCT----

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGTCTTACT
NGGGATTA--