Information for motif48


Reverse Opposite:

p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.873
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif36.9
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets102.5 +/- 52.7bp
Average Position of motif in Background111.6 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACCGGATM-
ANCAGGATGT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACCGGATM--
RCCGGAARYN

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ACCGGATM---
AANNATCCGGATGTNN

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACCGGATM
ACCGGAAG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACCGGATM--
DCCGGAARYN

PB0020.1_Gabpa_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACCGGATM-----
CAATACCGGAAGTGTAA

MA0028.1_ELK1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACCGGATM
GAGCCGGAAG

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACCGGATM--
RCCGGAAGTD

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCGGATM-
AACCGGAAGT

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACCGGATM------
TGAACCGGATTAATGAA