Information for motif49


Reverse Opposite:

p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets72.9 +/- 48.8bp
Average Position of motif in Background84.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTCCACGC
ATCCAC--

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:2
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CTCCACGC-
---CACGCA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCCACGC--
TBGCACGCAA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCCACGC--
--GCACGTNC

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCACGC-----
GTGCCACGCGACTG

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTCCACGC---------
ACCGCCNTCCACGTGTANNGACA

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCCACGC-
-NCCACGTG

MA0056.1_MZF1_1-4/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCACGC
-TCCCCA-

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCACGC-
GCCCCGCCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCCACGC------
TCGACCCCGCCCCTAT