Information for motif52


Reverse Opposite:

p-value:1e-6
log p-value:-1.420e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets100.1 +/- 46.1bp
Average Position of motif in Background95.1 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCGCGT-
NNGCNCTGCGCGGC

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGCGCGT
NCGTCAGC----

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCGCGT--
CCACACAGCAGGAGA

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCGCGT--
GAGCACAGCAGGACA

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCGCGT--
CCACACAGCAGGAGA

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCGCGT
TGAGTCAGCA---

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCAGCGCGT
--CAGCC---

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTCAGCGCGT-
-----TGCGTG

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CTCAGCGCGT
AGGATGACTCAGCAC--

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCAGCGCGT--
CACAGCAGGGGG