Information for motif54


Reverse Opposite:

p-value:1e-4
log p-value:-9.886e+00
Information Content per bp:1.957
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets106.9 +/- 51.9bp
Average Position of motif in Background91.0 +/- 42.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCC--
AGCAGCTGCTNN

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCC-
CACAGCTGCAG

MA0500.1_Myog/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGGCC
NNGCAGCTGTC

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGCGGCC-
NCAGCTGCTG

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAGCGGCC----
CTCAGCAGCTGCTACTG

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCC
YAACBGCC

MA0499.1_Myod1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCC---
TGCAGCTGTCCCT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAGCGGCC
NNACAGCTGC-

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGGCC
NNGCAGCTGTT

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCC
CAGCTGNT