Information for motif6


Reverse Opposite:

p-value:1e-19
log p-value:-4.587e+01
Information Content per bp:1.735
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets97.0 +/- 57.1bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGTGTGGGAGAG
NGCGTGGGCGGR

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGGGAGAG--
GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGTGTGGGAGAG
TGCGTGGGYG--

MA0471.1_E2F6/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTGTGGGAGAG
-GGGCGGGAAGG

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTGTGGGAGAG
--CSTGGGAAAD

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTGTGGGAGAG-
TGCGGAGTGGGACTGG

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTGTGGGAGAG--
GGCGGGGGCGGGGG

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGTGTGGGAGAG--
----GGGGNGGGGC

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGTGGGAGAG
NNGTGNGGGCGGGAG--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGTGTGGGAGAG--
----DGGGYGKGGC