Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 2061)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 3374)	% of Background Sequences with Motif
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-3	-7.683e+00	0.1133	61.0	2.96%	63.1	1.87%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-2	-6.905e+00	0.1234	195.0	9.46%	255.3	7.58%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-2	-5.934e+00	0.2171	31.0	1.50%	29.3	0.87%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-2	-5.801e+00	0.2171	401.0	19.45%	576.3	17.12%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e-2	-5.625e+00	0.2171	4.0	0.19%	0.8	0.02%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-2	-5.462e+00	0.2171	48.0	2.33%	52.9	1.57%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-2	-5.375e+00	0.2171	12.0	0.58%	8.7	0.26%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-1	-4.485e+00	0.3469	188.0	9.12%	261.0	7.75%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-4.411e+00	0.3469	131.0	6.35%	175.3	5.21%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-4.296e+00	0.3469	115.0	5.58%	152.5	4.53%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-1	-4.088e+00	0.3750	36.0	1.75%	40.1	1.19%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-1	-4.075e+00	0.3750	106.0	5.14%	140.2	4.17%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-1	-4.071e+00	0.3750	80.0	3.88%	102.3	3.04%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-4.013e+00	0.3750	136.0	6.60%	186.0	5.52%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-1	-3.948e+00	0.3750	322.0	15.62%	471.5	14.01%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-3.783e+00	0.3750	232.0	11.25%	333.1	9.90%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e-1	-3.727e+00	0.3750	30.0	1.45%	33.2	0.99%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-1	-3.715e+00	0.3750	3.0	0.15%	0.0	0.00%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e-1	-3.658e+00	0.3750	336.0	16.29%	496.2	14.74%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-1	-3.548e+00	0.3750	87.0	4.22%	115.6	3.43%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-1	-3.260e+00	0.4497	44.0	2.13%	55.0	1.63%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-3.243e+00	0.4497	23.0	1.12%	25.0	0.74%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-1	-3.241e+00	0.4497	5.0	0.24%	3.7	0.11%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e-1	-3.241e+00	0.4497	5.0	0.24%	3.9	0.12%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-1	-3.196e+00	0.4497	209.0	10.14%	303.6	9.02%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-3.185e+00	0.4497	57.0	2.76%	73.5	2.18%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.079e+00	0.4497	35.0	1.70%	42.1	1.25%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-3.022e+00	0.4497	44.0	2.13%	55.1	1.64%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-1	-2.959e+00	0.4497	125.0	6.06%	176.4	5.24%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-1	-2.916e+00	0.4497	573.0	27.79%	882.1	26.20%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-1	-2.819e+00	0.4734	78.0	3.78%	106.0	3.15%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-2.646e+00	0.5455	137.0	6.64%	197.6	5.87%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-1	-2.533e+00	0.5923	456.0	22.11%	701.1	20.82%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-1	-2.410e+00	0.6500	19.0	0.92%	22.3	0.66%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e-1	-2.356e+00	0.6662	209.0	10.14%	312.6	9.29%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-2.352e+00	0.6662	35.0	1.70%	45.4	1.35%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-2.299e+00	0.6675	396.0	19.20%	609.9	18.12%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-2.294e+00	0.6675	330.0	16.00%	504.2	14.97%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-2.287e+00	0.6675	18.0	0.87%	21.0	0.62%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-2.283e+00	0.6675	129.0	6.26%	188.3	5.59%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.281e+00	0.6675	5.0	0.24%	4.3	0.13%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-2.266e+00	0.6675	353.0	17.12%	541.9	16.10%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-2.240e+00	0.6675	9.0	0.44%	9.9	0.29%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.217e+00	0.6675	12.0	0.58%	13.6	0.40%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-2.215e+00	0.6675	40.0	1.94%	53.9	1.60%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.179e+00	0.6675	305.0	14.79%	466.7	13.86%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-2.155e+00	0.6675	33.0	1.60%	43.3	1.28%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.981e+00	0.7068	13.0	0.63%	15.2	0.45%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.961e+00	0.7068	125.0	6.06%	185.4	5.51%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.956e+00	0.7068	53.0	2.57%	74.8	2.22%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.922e+00	0.7068	22.0	1.07%	29.0	0.86%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.860e+00	0.7361	44.0	2.13%	61.4	1.82%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.850e+00	0.7361	63.0	3.06%	90.7	2.69%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-1.848e+00	0.7361	12.0	0.58%	14.3	0.43%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.766e+00	0.7647	33.0	1.60%	45.3	1.34%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.765e+00	0.7647	123.0	5.97%	184.8	5.49%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.748e+00	0.7647	280.0	13.58%	433.2	12.87%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.703e+00	0.7728	59.0	2.86%	86.0	2.55%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.693e+00	0.7728	40.0	1.94%	56.3	1.67%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.676e+00	0.7728	298.0	14.45%	463.8	13.78%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.628e+00	0.7914	43.0	2.09%	61.3	1.82%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.610e+00	0.7935	17.0	0.82%	22.6	0.67%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.599e+00	0.7935	254.0	12.32%	394.4	11.72%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.599e+00	0.7935	357.0	17.31%	559.5	16.62%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.591e+00	0.7935	154.0	7.47%	235.5	6.99%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.538e+00	0.8010	101.0	4.90%	152.1	4.52%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.527e+00	0.8010	85.0	4.12%	127.0	3.77%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.499e+00	0.8077	179.0	8.68%	276.2	8.20%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.465e+00	0.8235	200.0	9.70%	310.6	9.22%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.415e+00	0.8535	29.0	1.41%	41.3	1.23%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.382e+00	0.8700	635.0	30.80%	1013.9	30.12%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.381e+00	0.8700	17.0	0.82%	23.5	0.70%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.379e+00	0.8700	269.0	13.05%	422.9	12.56%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.351e+00	0.8700	80.0	3.88%	121.1	3.60%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.308e+00	0.8865	24.0	1.16%	34.3	1.02%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.301e+00	0.8865	44.0	2.13%	66.0	1.96%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.278e+00	0.8902	10.0	0.48%	13.3	0.39%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.277e+00	0.8902	94.0	4.56%	144.9	4.30%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.253e+00	0.8902	232.0	11.25%	365.4	10.85%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.200e+00	0.9265	46.0	2.23%	69.4	2.06%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.151e+00	0.9610	11.0	0.53%	15.2	0.45%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.122e+00	0.9771	129.0	6.26%	202.7	6.02%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.121e+00	0.9771	99.0	4.80%	154.8	4.60%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.078e+00	0.9965	56.0	2.72%	86.9	2.58%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.064e+00	0.9965	23.0	1.12%	34.3	1.02%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.064e+00	0.9965	23.0	1.12%	34.7	1.03%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.063e+00	0.9965	30.0	1.45%	45.1	1.34%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.056e+00	0.9965	442.0	21.44%	709.4	21.07%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.041e+00	0.9965	112.0	5.43%	176.6	5.25%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.024e+00	0.9965	55.0	2.67%	85.8	2.55%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.003e+00	0.9965	6.0	0.29%	8.2	0.24%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-9.894e-01	0.9965	51.0	2.47%	79.2	2.35%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-9.699e-01	1.0000	224.0	10.86%	358.9	10.66%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-9.308e-01	1.0000	153.0	7.42%	244.9	7.27%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-9.201e-01	1.0000	28.0	1.36%	43.3	1.28%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-9.011e-01	1.0000	51.0	2.47%	80.5	2.39%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-8.799e-01	1.0000	44.0	2.13%	69.3	2.06%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-8.307e-01	1.0000	177.0	8.58%	286.0	8.49%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-8.291e-01	1.0000	103.0	5.00%	165.2	4.91%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-7.966e-01	1.0000	57.0	2.76%	91.7	2.72%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-7.932e-01	1.0000	583.0	28.27%	948.0	28.16%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-7.810e-01	1.0000	148.0	7.18%	239.6	7.12%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-7.807e-01	1.0000	1.0	0.05%	0.7	0.02%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-7.807e-01	1.0000	1.0	0.05%	0.9	0.03%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-7.680e-01	1.0000	189.0	9.17%	306.1	9.09%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-7.627e-01	1.0000	133.0	6.45%	215.4	6.40%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-7.324e-01	1.0000	38.0	1.84%	62.0	1.84%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-7.221e-01	1.0000	76.0	3.69%	123.2	3.66%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-6.892e-01	1.0000	355.0	17.22%	579.9	17.23%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-6.789e-01	1.0000	356.0	17.26%	581.7	17.28%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-6.789e-01	1.0000	48.0	2.33%	78.1	2.32%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-6.762e-01	1.0000	895.0	43.40%	1461.8	43.42%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-6.501e-01	1.0000	85.0	4.12%	139.9	4.16%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-6.467e-01	1.0000	206.0	9.99%	337.6	10.03%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-6.460e-01	1.0000	110.0	5.33%	180.9	5.37%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-6.362e-01	1.0000	33.0	1.60%	54.2	1.61%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-6.193e-01	1.0000	244.0	11.83%	400.6	11.90%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-6.177e-01	1.0000	28.0	1.36%	46.1	1.37%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-6.150e-01	1.0000	170.0	8.24%	279.0	8.29%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-6.007e-01	1.0000	2.0	0.10%	3.5	0.10%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-5.972e-01	1.0000	188.0	9.12%	309.8	9.20%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-5.770e-01	1.0000	134.0	6.50%	221.0	6.57%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-5.466e-01	1.0000	51.0	2.47%	85.2	2.53%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-5.432e-01	1.0000	304.0	14.74%	501.5	14.89%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-5.398e-01	1.0000	246.0	11.93%	406.9	12.09%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-5.359e-01	1.0000	19.0	0.92%	32.6	0.97%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-5.359e-01	1.0000	19.0	0.92%	32.6	0.97%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-5.296e-01	1.0000	75.0	3.64%	125.8	3.74%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-5.260e-01	1.0000	3.0	0.15%	5.2	0.15%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-4.904e-01	1.0000	33.0	1.60%	56.0	1.66%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-4.851e-01	1.0000	104.0	5.04%	174.7	5.19%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-4.754e-01	1.0000	18.0	0.87%	31.9	0.95%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-4.669e-01	1.0000	85.0	4.12%	143.9	4.27%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-4.598e-01	1.0000	106.0	5.14%	178.1	5.29%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-4.502e-01	1.0000	19.0	0.92%	33.7	1.00%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-4.415e-01	1.0000	16.0	0.78%	28.8	0.86%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-4.256e-01	1.0000	103.0	5.00%	174.3	5.18%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-4.244e-01	1.0000	52.0	2.52%	90.0	2.67%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-4.136e-01	1.0000	24.0	1.16%	42.9	1.28%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-4.106e-01	1.0000	125.0	6.06%	211.0	6.27%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-3.847e-01	1.0000	493.0	23.91%	819.2	24.33%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-3.729e-01	1.0000	340.0	16.49%	568.8	16.90%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-3.695e-01	1.0000	147.0	7.13%	249.4	7.41%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-3.673e-01	1.0000	162.0	7.86%	274.3	8.15%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-3.530e-01	1.0000	2.0	0.10%	4.1	0.12%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.484e-01	1.0000	38.0	1.84%	67.2	1.99%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-3.477e-01	1.0000	463.0	22.45%	772.0	22.93%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-3.474e-01	1.0000	86.0	4.17%	148.3	4.41%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-3.383e-01	1.0000	90.0	4.36%	155.2	4.61%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-3.327e-01	1.0000	631.0	30.60%	1049.3	31.17%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-3.142e-01	1.0000	105.0	5.09%	181.6	5.39%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-3.128e-01	1.0000	410.0	19.88%	687.0	20.41%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-3.077e-01	1.0000	48.0	2.33%	85.3	2.53%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-3.029e-01	1.0000	31.0	1.50%	56.5	1.68%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-2.956e-01	1.0000	228.0	11.06%	387.7	11.51%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.899e-01	1.0000	12.0	0.58%	23.3	0.69%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-2.860e-01	1.0000	124.0	6.01%	214.5	6.37%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-2.763e-01	1.0000	13.0	0.63%	25.0	0.74%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-2.734e-01	1.0000	91.0	4.41%	159.9	4.75%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-2.637e-01	1.0000	14.0	0.68%	27.3	0.81%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-2.536e-01	1.0000	116.0	5.63%	202.6	6.02%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.358e-01	1.0000	52.0	2.52%	94.6	2.81%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.329e-01	1.0000	763.0	37.00%	1274.8	37.86%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-2.253e-01	1.0000	452.0	21.92%	763.2	22.67%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-2.244e-01	1.0000	57.0	2.76%	103.8	3.08%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-2.213e-01	1.0000	3.0	0.15%	7.5	0.22%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.170e-01	1.0000	163.0	7.90%	283.9	8.43%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-2.104e-01	1.0000	2.0	0.10%	5.1	0.15%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-2.070e-01	1.0000	130.0	6.30%	228.9	6.80%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.060e-01	1.0000	37.0	1.79%	69.7	2.07%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-2.040e-01	1.0000	8.0	0.39%	17.1	0.51%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-2.039e-01	1.0000	137.0	6.64%	240.5	7.14%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-2.039e-01	1.0000	20.0	0.97%	39.1	1.16%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.913e-01	1.0000	10.0	0.48%	21.3	0.63%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-1.911e-01	1.0000	120.0	5.82%	212.6	6.31%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.779e-01	1.0000	41.0	1.99%	77.3	2.30%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.733e-01	1.0000	153.0	7.42%	269.5	8.01%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.701e-01	1.0000	144.0	6.98%	254.8	7.57%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-1.541e-01	1.0000	5.0	0.24%	12.3	0.37%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.541e-01	1.0000	5.0	0.24%	12.1	0.36%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.538e-01	1.0000	7.0	0.34%	16.7	0.50%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.507e-01	1.0000	17.0	0.82%	36.0	1.07%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.458e-01	1.0000	113.0	5.48%	203.8	6.05%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-1.382e-01	1.0000	83.0	4.03%	152.9	4.54%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.352e-01	1.0000	31.0	1.50%	61.9	1.84%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.342e-01	1.0000	69.0	3.35%	128.3	3.81%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.295e-01	1.0000	37.0	1.79%	72.2	2.14%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.178e-01	1.0000	53.0	2.57%	102.0	3.03%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.108e-01	1.0000	105.0	5.09%	192.2	5.71%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.103e-01	1.0000	20.0	0.97%	42.9	1.27%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.077e-01	1.0000	47.0	2.28%	91.1	2.71%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.067e-01	1.0000	145.0	7.03%	261.8	7.78%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-1.050e-01	1.0000	13.0	0.63%	29.7	0.88%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.008e-01	1.0000	49.0	2.38%	95.3	2.83%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.008e-01	1.0000	62.0	3.01%	118.7	3.53%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-9.032e-02	1.0000	123.0	5.97%	225.5	6.70%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-9.009e-02	1.0000	254.0	12.32%	448.7	13.33%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-8.804e-02	1.0000	62.0	3.01%	119.5	3.55%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-8.765e-02	1.0000	464.0	22.50%	800.7	23.78%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-8.372e-02	1.0000	161.0	7.81%	292.0	8.67%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-8.201e-02	1.0000	315.0	15.28%	552.5	16.41%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-7.368e-02	1.0000	200.0	9.70%	359.1	10.67%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-7.129e-02	1.0000	903.0	43.79%	1528.7	45.41%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-6.369e-02	1.0000	54.0	2.62%	107.5	3.19%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-6.057e-02	1.0000	9.0	0.44%	23.6	0.70%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-5.878e-02	1.0000	75.0	3.64%	145.5	4.32%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-5.750e-02	1.0000	19.0	0.92%	43.6	1.30%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-5.533e-02	1.0000	30.0	1.45%	64.1	1.90%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-5.294e-02	1.0000	60.0	2.91%	119.1	3.54%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-5.248e-02	1.0000	175.0	8.49%	320.7	9.52%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-5.149e-02	1.0000	128.0	6.21%	239.1	7.10%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-4.986e-02	1.0000	198.0	9.60%	360.8	10.72%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-4.907e-02	1.0000	41.0	1.99%	85.9	2.55%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-4.411e-02	1.0000	4.0	0.19%	13.0	0.39%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-4.004e-02	1.0000	109.0	5.29%	208.4	6.19%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-3.629e-02	1.0000	224.0	10.86%	408.4	12.13%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-3.567e-02	1.0000	14.0	0.68%	35.4	1.05%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-3.350e-02	1.0000	5.0	0.24%	16.0	0.48%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-3.017e-02	1.0000	224.0	10.86%	410.1	12.18%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-2.998e-02	1.0000	147.0	7.13%	277.5	8.24%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-2.768e-02	1.0000	169.0	8.20%	316.2	9.39%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-2.697e-02	1.0000	22.0	1.07%	52.9	1.57%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.583e-02	1.0000	212.0	10.28%	391.1	11.62%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-2.227e-02	1.0000	443.0	21.48%	785.6	23.33%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-2.021e-02	1.0000	246.0	11.93%	452.2	13.43%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.814e-02	1.0000	34.0	1.65%	77.7	2.31%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.745e-02	1.0000	162.0	7.86%	308.4	9.16%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.640e-02	1.0000	23.0	1.12%	56.4	1.68%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.585e-02	1.0000	128.0	6.21%	249.4	7.41%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.484e-02	1.0000	8.0	0.39%	25.2	0.75%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.443e-02	1.0000	13.0	0.63%	36.2	1.07%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.188e-02	1.0000	4.0	0.19%	17.0	0.50%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.187e-02	1.0000	855.0	41.46%	1478.8	43.92%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-1.096e-02	1.0000	49.0	2.38%	108.6	3.23%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-8.284e-03	1.0000	123.0	5.97%	245.4	7.29%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-6.900e-03	1.0000	210.0	10.18%	400.2	11.89%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-5.463e-03	1.0000	42.0	2.04%	98.5	2.93%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-4.317e-03	1.0000	283.0	13.72%	532.0	15.80%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-4.272e-03	1.0000	10.0	0.48%	33.9	1.01%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-3.133e-03	1.0000	79.0	3.83%	171.0	5.08%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-2.691e-03	1.0000	92.0	4.46%	197.0	5.85%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.728e-03	1.0000	62.0	3.01%	142.2	4.22%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-3.880e-04	1.0000	61.0	2.96%	147.8	4.39%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.700e-04	1.0000	117.0	5.67%	259.0	7.69%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-4.800e-05	1.0000	387.0	18.77%	749.5	22.26%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%