Information for motif10


Reverse Opposite:

p-value:1e-30
log p-value:-7.093e+01
Information Content per bp:1.764
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets96.3 +/- 49.7bp
Average Position of motif in Background61.7 +/- 42.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAAAATM
CTACCAATAAAATTCT-

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AATAAAAAAATM
NCYAATAAAA-----

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AATAAAAAAATM
GTCATAAAAN----

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAAAATM
AACCCAATAAAATTCG-

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAAAATM
AATGCAATAAAATTTAT

MA0465.1_CDX2/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AATAAAAAAATM
AAGCCATAAAA-----

MA0042.1_FOXI1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATAAAAAAATM
AAACAAACANNC-

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AATAAAAAAATM
AAATAAACA----

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AATAAAAAAATM-
GTTAAAAAAAAAAATTA

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAAAATM
GTTCAAAAAAAAAATTC