Information for motif12


Reverse Opposite:

p-value:1e-29
log p-value:-6.838e+01
Information Content per bp:1.509
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets99.8 +/- 55.5bp
Average Position of motif in Background88.9 +/- 47.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGCATATGGTCC
AACAGATGGTCN

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGCATATGGTCC
AACAKATGGY--

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCATATGGTCC
VNAVCAGCTGGC--

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCATATGGTCC
AAGCACATGG---

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCATATGGTCC
AACAGATGGC--

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCATATGGTCC
AAGCACATGG---

MA0059.1_MYC::MAX/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCATATGGTCC
GACCACGTGGT--

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCATATGGTCC--
AAGGCCAGATGGTCCGG

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGCATATGGTCC
ACAGGATGTGGT--

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCATATGGTCC
ANCAGCTG----