Information for motif18


Reverse Opposite:

p-value:1e-27
log p-value:-6.419e+01
Information Content per bp:1.673
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets94.0 +/- 48.3bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCGGTTC
AAGCTTG----

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCTCGGTTC
CAGCC------

POL001.1_MTE/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTCGGTTC----
NCGACCGCTCCGCTCGAAA

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCTCGGTTC
-TGTCGGTT-

PB0162.1_Sfpi1_2/Jaspar

Match Rank:5
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGCTCGGTTC---------
-----GGTTCCNNAATTTG

MA0048.1_NHLH1/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGCTCGGTTC
GCGCAGCTGCGT--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCGGTTC
HCAGCTGDTN--

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGCTCGGTTC---
---TGGTTTCAGT

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----AGCTCGGTTC
NTGCAGCTGTG---

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGCTCGGTTC
-GCTCCG---