Information for motif19


Reverse Opposite:

p-value:1e-27
log p-value:-6.419e+01
Information Content per bp:1.388
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets77.6 +/- 48.0bp
Average Position of motif in Background77.0 +/- 64.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCAGGCCCCGND---
-CAGGCCNNGGCCNN

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GCAGGCCCCGND
--AGGCCTAG--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCAGGCCCCGND
--AGGCCTNG--

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCAGGCCCCGND---
---GGCCCCGCCCCC

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCAGGCCCCGND
----GCTCCG--

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGGCCCCGND--
TCCGCCCCCGCATT

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAGGCCCCGND--
TTGGGGGCGCCCCTAG

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCAGGCCCCGND-
---GGTCCCGCCC

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGGCCCCGND---
TATCGACCCCCCACAG

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCAGGCCCCGND
----TCCCCA--