Information for motif20


Reverse Opposite:

p-value:1e-27
log p-value:-6.419e+01
Information Content per bp:1.757
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets100.6 +/- 46.2bp
Average Position of motif in Background97.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTGTTACA
ACTTCCTGTT---

MA0474.1_Erg/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCTGTTACA
CCACTTCCTGT----

MA0098.2_Ets1/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CTTCCTGTTACA
CCCACTTCCTGTCTC-

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CTTCCTGTTACA
CACTTCCTGT----

MA0473.1_ELF1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CTTCCTGTTACA
CACTTCCTGNTTC-

MA0475.1_FLI1/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CTTCCTGTTACA
CCACTTCCTGT----

MA0598.1_EHF/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTGTTACA
CCTTCCTG-----

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTGTTACA
ACTTCCGGTT---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTGTTACA
ATTTCCTGTN---

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTGTTACA
ACTTCCTGBT---