Information for motif23


Reverse Opposite:

p-value:1e-24
log p-value:-5.547e+01
Information Content per bp:1.732
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets91.6 +/- 54.6bp
Average Position of motif in Background158.2 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCGCCACCCGGG
GCCCCGCCCC--

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGCCACCCGGG
GCCCCACCCA--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGCCACCCGGG
GCCMCRCCCH--

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCGCCACCCGGG----
-NCCCCCCCGGGGGGN

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCGCCACCCGGG----
--CCCCCCCGGGGGNN

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCGCCACCCGGG-----
--CCCCCCCGGGGGGGT

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGCCACCCGGG
GGCCACACCCA--

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCACCCGGG
GGCCACACCCAN-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCGCCACCCGGG
GCCACACCCA--

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCGCCACCCGGG
GGACCACCCACG