Information for motif24


Reverse Opposite:

p-value:1e-23
log p-value:-5.359e+01
Information Content per bp:1.761
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets73.7 +/- 57.2bp
Average Position of motif in Background84.8 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACGAGYTG-
--GTGTTGN

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACGAGYTG-
NAHCAGCTGD

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACGAGYTG-----
TCNCCTGCTGNGNNN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACGAGYTG-
CAGCAGCTGN

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACGAGYTG-----
NNTCCTGCTGTGNNN

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACGAGYTG----
----GCTGACGC

MA0461.1_Atoh1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACGAGYTG
GCCATCTG

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACGAGYTG
---NGCTN

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACGAGYTG-----
TNTCCTGCTGTGNNG

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACGAGYTG--
RCCATMTGTT