Information for motif25


Reverse Opposite:

p-value:1e-22
log p-value:-5.263e+01
Information Content per bp:1.734
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets118.7 +/- 57.6bp
Average Position of motif in Background108.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTGCGCGCCGC
NNGCNCTGCGCGGC--

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTGCGCGCCGC
--AGCGCGCC--

MA0506.1_NRF1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCTGCGCGCCGC
GCGCCTGCGCA----

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGCGCCGC-
NCANGCGCGCGCGCCA

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCTGCGCGCCGC----
----GGCCCCGCCCCC

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTGCGCGCCGC-------
--TACGCCCCGCCACTCTG

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTGCGCGCCGC---
NTCGCGCGCCTTNNN

NRF1/Promoter/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGCGCCGC
GCGCATGCGCAC---

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCGCGCCGC---
NNNGGGGCGCCCCCNN

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTGCGCGCCGC---
ANCGCGCGCCCTTNN