Information for motif30


Reverse Opposite:

p-value:1e-21
log p-value:-4.983e+01
Information Content per bp:1.507
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets81.2 +/- 46.9bp
Average Position of motif in Background40.1 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAGAAAAG-
AAGATAAGATAACA

MA0035.3_Gata1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAGAAAAG
ANAGATAAGAA---

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAGAAGAAAAG
AGATAAGA----

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAGAAGAAAAG--
AAATAAGAAAAAAC

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AGAGAAGAAAAG---
TTTTTAGAGATAAGAAATAAAG

MA0482.1_Gata4/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAGAAAAG
NNGAGATAAGA----

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAAGAAAAG
NAGATAAGNN---

MA0036.2_GATA2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAGAAAAG
NCAGATAAGAANNN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGAGAAGAAAAG
TACTGGAAAAAAAA

MA0514.1_Sox3/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAGAAGAAAAG
--AAAACAAAGG