Information for motif31


Reverse Opposite:

p-value:1e-21
log p-value:-4.943e+01
Information Content per bp:1.897
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets89.3 +/- 58.0bp
Average Position of motif in Background72.5 +/- 44.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGT
AGGCCTAG--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGT
AGGCCTNG--

MA0009.1_T/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCCTAGGT-----
--CTAGGTGTGAA

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGT------
TCGCGAAGGTTGTACT

MA0592.1_ESRRA/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCTAGGT----
-CCAAGGTCACA

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGT-----
TACCCTAGTTACCGA

MA0146.2_Zfx/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAGGT---
CAGGCCNNGGCCNN

MA0141.2_Esrrb/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGT--
AGCTCAAGGTCA

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTAGGT--
BTCAAGGTCA

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGT
TGCCAA---