Information for motif33


Reverse Opposite:

p-value:1e-21
log p-value:-4.888e+01
Information Content per bp:1.699
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets96.8 +/- 59.5bp
Average Position of motif in Background119.3 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGGATTT
TTTTTTTTCNNGTN

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTTGGATTT
NGANTTTTATGGCTCN

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGGATTT
NNTTTTTCTTATNT

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTGGATTT-
ANATTTTTGCAANTN

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTTGGATTT
NNTTTTGTTTTGATNT

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTTGGATTT
NNAATTTTATTGGNTN-

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTTTTTGGATTT--
---TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTTTTGGATTT-
-NNTGTGGATTSS

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTTGGATTT
GNATTTTTTTTTTGANC-

MA0465.1_CDX2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTTTGGATTT
TTTTATGGCTN-