Information for motif35


Reverse Opposite:

p-value:1e-19
log p-value:-4.434e+01
Information Content per bp:1.543
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets69.5 +/- 43.9bp
Average Position of motif in Background99.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GCACGCTCCT
----GCTCCG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCACGCTCCT
-CACGCA---

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCACGCTCCT
TBGCACGCAA--

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCACGCTCCT------
ACATGCTACCTAATAC

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCACGCTCCT
----GCTTCC

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCACGCTCCT-
GTGCCACGCGACTG

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCACGCTCCT
---NGCTN--

MA0506.1_NRF1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCACGCTCCT
TGCGCAGGCGC--

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCACGCTCCT--
TGGCGCGCGCGCCTGA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCACGCTCCT
GCACGTNC--