Information for motif43


Reverse Opposite:

p-value:1e-15
log p-value:-3.559e+01
Information Content per bp:1.845
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets90.4 +/- 53.9bp
Average Position of motif in Background82.7 +/- 49.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCGCATAC----
--RCATTCCWGG

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TCGCATAC--
TNTAATTTGCATACNA

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TCGCATAC--
TNTAATTTGCATANNN

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGCATAC
ATTTGCATAA

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGCATAC-------
GACCACATTCATACAAT

NRF1/Promoter/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGCATAC----
GCGCATGCGCAC

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCGCATAC-----
-CACATTCCTCCG

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TCGCATAC----
TNNTTTCGTATTNNANN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCGCATAC
ATTTGCATAT

MA0507.1_POU2F2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCGCATAC
TTCATTTGCATAT