Information for motif49


Reverse Opposite:

p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.530
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets97.0 +/- 56.3bp
Average Position of motif in Background100.6 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ATGACTGC
CATGAC---

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATGACTGC-----
GATATTGACAGCTGCGT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATGACTGC
AAATCACTGC

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATGACTGC
NCGTGACN--

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATGACTGC
NNTNTCATGAATGT

Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------ATGACTGC
GTCATGCHTGRCTGS

MA0498.1_Meis1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATGACTGC-
NNNTGAGTGACAGCT

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGACTGC-----
TNNNATGATTTCNNCNN

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGACTGC-----
NTATTGACAGCTNNTT

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGACTGC-----
GTATTGACAGCTNNTT